STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG1904Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to PFAM protein family HMM PF00106. (270 aa)    
Predicted Functional Partners:
SAG1905
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.960
SAG1906
Carbohydrate kinase, PfkB family; Identified by match to PFAM protein family HMM PF00294.
 
 
 0.909
eda-2
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by match to PFAM protein family HMM PF01081.
  
  
 0.883
SAG1901
Glucuronyl hydrolase; Similar to GP:5869507; identified by sequence similarity; putative.
 
   
 0.872
adhE
Aldehyde-alcohol dehydrogenase; Identified by match to PFAM protein family HMM PF00171; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.812
SAG0697
2-keto-3-deoxygluconate kinase; Identified by match to PFAM protein family HMM PF00294.
 
 
 0.794
SAG1897
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.788
SAG1346
PTS system, fructose specific IIABC components; Identified by match to PFAM protein family HMM PF00359.
  
 0.746
SAG1899
PTS system, IIC component.
 
     0.740
SAG0192
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
     
 0.733
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.