Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cdsAPhosphatidate cytidylyltransferase; Identified by match to PFAM protein family HMM PF01148; Belongs to the CDS family. (264 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.991
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to PFAM protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.986
SAG0780
Identified by match to PFAM protein family HMM PF01553.
    
 0.940
SAG1914
Membrane-associated zinc metalloprotease, putative; Identified by match to TIGR protein family HMM TIGR00054.
 
  
 0.920
SAG0851
bmrU protein, putative; Identified by match to PFAM protein family HMM PF00781.
    
 0.913
dgkA
Diacylglycerol kinase; Identified by match to PFAM protein family HMM PF01219.
    
 0.741
cls
Cardiolipin synthetase; Identified by match to PFAM protein family HMM PF00614; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
 0.735
SAG0003
Diacylglycerol kinase catalytic domain protein, putative; Identified by match to PFAM protein family HMM PF00781.
    
 0.723
SAG1320
Conserved hypothetical protein TIGR00147; Identified by Glimmer2; putative.
    
 0.690
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
  
    0.683
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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