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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAPhosphatidate cytidylyltransferase; Identified by match to PFAM protein family HMM PF01148; Belongs to the CDS family. (264 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.990
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to PFAM protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.957
SAG1914
Membrane-associated zinc metalloprotease, putative; Identified by match to TIGR protein family HMM TIGR00054.
 
    0.868
SAG0780
Identified by match to PFAM protein family HMM PF01553.
    
 0.748
cls
Cardiolipin synthetase; Identified by match to PFAM protein family HMM PF00614; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
 0.716
dgkA
Diacylglycerol kinase; Identified by match to PFAM protein family HMM PF01219.
    
 0.682
gdhA
NADP-specific glutamate dehydrogenase; Identified by match to PFAM protein family HMM PF00208; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
      0.644
SAG0003
Diacylglycerol kinase catalytic domain protein, putative; Identified by match to PFAM protein family HMM PF00781.
    
 0.638
SAG0851
bmrU protein, putative; Identified by match to PFAM protein family HMM PF00781.
    
 0.638
SAG1320
Conserved hypothetical protein TIGR00147; Identified by Glimmer2; putative.
    
 0.638
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.