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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG1925Sugar ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005; Belongs to the ABC transporter superfamily. (377 aa)    
Predicted Functional Partners:
SAG0036
Sugar ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.998
SAG1443
Maltose ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.998
SAG1441
Maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein; Identified by match to PFAM protein family HMM PF01547.
 
 0.997
SAG1442
Maltose ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.995
SAG0035
Sugar ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.994
SAG0034
Sugar ABC transporter, sugar-binding protein; Identified by match to PFAM protein family HMM PF01547.
  
 0.981
SAG0192
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
   
 
 0.786
potD
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein; Identified by match to PFAM protein family HMM PF01547.
    
 0.777
SAG1690
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
   
 
 0.758
potB
Spermidine/putrescine ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
  
 0.747
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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