Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAG1925Sugar ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005; Belongs to the ABC transporter superfamily. (377 aa)    
Predicted Functional Partners:
SAG1441
Maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein; Identified by match to PFAM protein family HMM PF01547.
 
 0.999
SAG1442
Maltose ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.999
SAG1443
Maltose ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.999
SAG0036
Sugar ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.997
SAG0035
Sugar ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 0.994
SAG0034
Sugar ABC transporter, sugar-binding protein; Identified by match to PFAM protein family HMM PF01547.
  
 0.974
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 
0.804
SAG1926
Helix-turn-helix domain protein, fis-type; Identified by match to TIGR protein family HMM TIGR01199.
 
  
 0.771
SAG1945
Iron ABC transporter, iron-binding protein; Identified by match to PFAM protein family HMM PF01547.
  
 
 0.713
SAG0192
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
   
 
 0.689
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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