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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG1927lacX protein; Identified by match to PFAM protein family HMM PF02693. (298 aa)    
Predicted Functional Partners:
SAG0192
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.933
SAG0790
PTS system, beta-glucosides-specific IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.933
SAG1690
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.933
SAG1959
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.933
SAG1753
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.868
SAG0282
PTS system, IIBC components; Identified by match to PFAM protein family HMM PF00367.
    
 0.850
galE
UDP-glucose 4-epimerase; Identified by match to PFAM protein family HMM PF01370; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.802
lacD
Tagatose 1,6-diphosphate aldolase; Identified by match to TIGR protein family HMM TIGR01232; Belongs to the aldolase LacD family.
  
  
 0.780
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.741
SAG0698
Beta-glucuronidase; Identified by match to PFAM protein family HMM PF00703; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.730
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.