Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SAG1927lacX protein; Identified by match to PFAM protein family HMM PF02693. (298 aa)    
Predicted Functional Partners:
SAG0192
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.906
SAG0790
PTS system, beta-glucosides-specific IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.906
SAG1690
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.906
SAG1959
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.906
lacD
Tagatose 1,6-diphosphate aldolase; Identified by match to TIGR protein family HMM TIGR01232; Belongs to the aldolase LacD family.
  
  
 0.844
SAG1753
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.786
lacB
Galactose-6-phosphate isomerase, LacB subunit; Identified by match to PFAM protein family HMM PF02502.
  
  
 0.779
lacC
Tagatose-6-phosphate kinase; Identified by match to PFAM protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.770
lacA
Galactose-6-phosphate isomerase, LacA subunit; Identified by match to PFAM protein family HMM PF02502.
  
  
 0.755
SAG0282
PTS system, IIBC components; Identified by match to PFAM protein family HMM PF00367.
    
 0.722
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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