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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacDTagatose 1,6-diphosphate aldolase; Identified by match to TIGR protein family HMM TIGR01232; Belongs to the aldolase LacD family. (325 aa)    
Predicted Functional Partners:
lacC
Tagatose-6-phosphate kinase; Identified by match to PFAM protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.996
lacB
Galactose-6-phosphate isomerase, LacB subunit; Identified by match to PFAM protein family HMM PF02502.
 
  
 0.974
lacA
Galactose-6-phosphate isomerase, LacA subunit; Identified by match to PFAM protein family HMM PF02502.
 
  
 0.963
fruK
1-phosphofructokinase; Identified by match to PFAM protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.802
SAG1927
lacX protein; Identified by match to PFAM protein family HMM PF02693.
  
  
 0.780
SAG1932
Identified by match to PFAM protein family HMM PF02012.
     
 0.756
galE
UDP-glucose 4-epimerase; Identified by match to PFAM protein family HMM PF01370; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.737
SAG1934
PTS system, IIB component, putative; Similar to OMNI:NTL01SPL1345; identified by sequence similarity; putative.
 
     0.724
SAG1933
PTS system, IIC component, putative.
 
     0.721
SAG1490
Transcriptional regulator, MutR family; Identified by match to PFAM protein family HMM PF01381.
  
 
  0.669
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.