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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG1944Conserved hypothetical protein; Identified by Glimmer2; putative. (165 aa)    
Predicted Functional Partners:
SAG1943
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.800
nrdI-2
nrdI protein; Identified by match to TIGR protein family HMM TIGR00333; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002; Belongs to the NrdI family.
       0.785
cpdB
2',3'-cyclic-nucleotide 2'-phosphodiesterase; Identified by match to PFAM protein family HMM PF00149.
    
  0.690
SAG0994
Identified by match to PFAM protein family HMM PF00459.
  
 
 0.653
SAG1658
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
 0.650
SAG0451
Bacteriocin transport accessory protein, putative.
     
 0.631
SAG0537
DHH family protein; Identified by match to PFAM protein family HMM PF01368.
   
 
  0.607
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
 0.607
hit
HIT family protein; Identified by match to PFAM protein family HMM PF01230.
    
  0.606
SAG0226
Identified by match to PFAM protein family HMM PF01076.
  
  
 0.558
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.