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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG1958Conserved hypothetical protein; Identified by Glimmer2; putative. (276 aa)    
Predicted Functional Partners:
SAG1959
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
 
 
 0.994
csdB
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
   0.976
SAG0192
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
 
 
 0.952
SAG1690
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
 
 
 0.948
SAG0790
PTS system, beta-glucosides-specific IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
 
 0.940
SAG0282
PTS system, IIBC components; Identified by match to PFAM protein family HMM PF00367.
  
 
 0.845
malQ
4-alpha-glucanotransferase; Identified by match to PFAM protein family HMM PF02446.
    
 0.711
cls
Cardiolipin synthetase; Identified by match to PFAM protein family HMM PF00614; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
 
 0.703
SAG0708
Identified by match to PFAM protein family HMM PF00128.
  
 
 0.640
exoA
Exodeoxyribonuclease; Identified by match to PFAM protein family HMM PF01260; In Gram negative bacteria, the apparent functional equivalent is known as exodeoxyribonuclease III (xth).
  
 
 0.614
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.