STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG1996Cell wall surface anchor family protein, putative. (263 aa)    
Predicted Functional Partners:
SAG1997
Hypothetical protein; Identified by Glimmer2; putative.
       0.742
SAG1998
Hypothetical protein; Identified by Glimmer2; putative.
       0.737
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.674
SAG1577
AcuB family protein; Identified by match to PFAM protein family HMM PF00571.
    
  0.569
SAG1995
Hypothetical protein; Identified by Glimmer2; putative.
       0.556
SAG1999
Hypothetical protein; Identified by Glimmer2; putative.
       0.495
SAG0598
Prophage LambdaSa1, N-acetylmuramoyl-L-alanine amidase, family 4; Identified by match to PFAM protein family HMM PF01832.
  
     0.456
rpmI
Ribosomal protein L35; Identified by match to PFAM protein family HMM PF01632; Belongs to the bacterial ribosomal protein bL35 family.
   
   0.429
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
   
 0.413
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.