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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG2011Conserved hypothetical protein; Identified by Glimmer2; putative. (160 aa)    
Predicted Functional Partners:
SAG2010
Hypothetical protein; Identified by Glimmer2; putative.
       0.787
int
Tn916, transposase; Identified by match to PFAM protein family HMM PF00589; Belongs to the 'phage' integrase family.
  
     0.670
SAG0919
Tn916, hypothetical protein; Identified by Glimmer2; putative.
  
    0.639
SAG0921
Tn916, transcriptional regulator, putative; Identified by match to PFAM protein family HMM PF01381.
  
     0.635
SAG0925
Tn916, hypothetical protein; Identified by Glimmer2; putative.
 
     0.635
SAG0926
Identified by match to PFAM protein family HMM PF00877.
 
    0.625
SAG2012
Hypothetical protein; Identified by Glimmer2; putative.
       0.617
SAG0927
Membrane protein, putative.
  
     0.613
SAG0933
Identified by match to PFAM protein family HMM PF01580.
 
    0.613
SAG0918
Tn916, hypothetical protein; Identified by Glimmer2; putative.
  
     0.606
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.