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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG2018Identified by match to PFAM protein family HMM PF01580. (553 aa)    
Predicted Functional Partners:
SAG2017
Transcriptional regulator, Cro/CI family; Identified by match to PFAM protein family HMM PF01381.
 
  
 0.872
SAG0932
Tn916, transcriptional regulator, putative; Identified by match to PFAM protein family HMM PF01381.
 
    0.768
SAG2114
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.758
SAG0931
Tn916, hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.756
SAG1988
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.744
SAG0930
Tn916, hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.722
SAG0230
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.711
SAG1039
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.711
SAG0929
Tn916, hypothetical protein; Identified by Glimmer2; putative.
 
    0.709
SAG0934
Tn916, hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.709
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.