STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIG76419.1Conserved putative secreted protein. (532 aa)    
Predicted Functional Partners:
AIG76421.1
Conserved putative secreted protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.972
AIG76420.1
Nickel ABC transporter, permease subunit NikB.
 
 
 0.960
AIG76423.1
Hypothetical protein.
 
     0.943
AIG76422.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.915
AIG76414.1
Hypothetical protein.
 
    0.760
AIG76412.1
Hypothetical protein.
 
     0.641
AIG75392.1
Conserved putative secreted protein.
 
 
 0.623
AIG75393.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.584
AIG76417.1
Beta-lactamase.
  
     0.582
AIG80951.1
Conserved putative membrane protein.
 
 
 0.559
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.