STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIG78767.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
AIG75980.1
Hypothetical protein.
 
 
 0.692
AIG75547.1
Triacylglycerol lipase.
  
     0.660
AIG75419.1
Triacylglycerol lipase.
  
     0.640
AIG79164.1
Hypothetical protein.
 
 
 0.603
AIG79156.1
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.601
AIG78768.1
Conserved putative membrane protein.
       0.574
AIG78099.1
Hypothetical protein.
  
     0.558
AIG80576.1
Conserved putative membrane protein.
  
    0.558
AIG73258.1
Hypothetical protein.
 
 
 0.557
AIG78795.1
Two-component system sensor kinase.
  
  
 0.556
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.