STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIG79895.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
AIG77849.1
Exodeoxyribonuclease III.
  
 0.717
AIG79882.1
Hypothetical protein.
  
 0.717
nfo
Putative endonuclease 4.
 
 
 0.676
AIG73071.1
Hypothetical protein; Belongs to the FPG family.
  
  
 0.587
AIG75064.1
Hypothetical protein.
 
  
 0.563
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.552
AIG79894.1
Putative HTH-type transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.542
AIG77667.1
Hypothetical protein.
 
   
 0.534
AIG73214.1
Hypothetical protein.
  
     0.532
AIG76846.1
5'-3' exonuclease.
 
 
 0.486
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
Server load: low (30%) [HD]