STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIG80524.1Hypothetical protein. (390 aa)    
Predicted Functional Partners:
AIG80522.1
Hypothetical protein.
       0.773
AIG80523.1
Conserved putative membrane protein.
       0.773
AIG78577.1
Hypothetical protein.
  
     0.611
AIG78731.1
Hypothetical protein.
  
     0.610
AIG80521.1
Hypothetical protein.
       0.523
AIG75857.1
FAD dependent oxidoreductase.
  
     0.492
mhpA
3-(3-hydroxyphenyl)propionate hydroxylase.
  
     0.439
AIG74775.1
Hypothetical protein.
  
     0.413
AIG75626.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.