STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIG80634.1Conserved putative membrane protein. (673 aa)    
Predicted Functional Partners:
AIG80635.1
Conserved putative membrane protein.
 
     0.835
AIG80255.1
Putative membrane protein.
  
   
 0.785
AIG80019.1
Hypothetical protein.
  
   
 0.770
AIG73062.1
Conserved putative membrane protein.
  
     0.769
AIG78827.1
Hypothetical protein.
  
     0.769
AIG81064.1
Hypothetical protein.
  
     0.767
AIG73061.1
Hypothetical protein.
  
     0.765
AIG75449.1
Hypothetical protein; Belongs to the WXG100 family.
  
   
 0.764
AIG80938.1
Hypothetical protein.
  
   
 0.764
AIG80013.1
Hypothetical protein.
  
   
 0.763
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.