STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIG80766.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
AIG80767.1
Hypothetical protein.
 
     0.885
AIG79161.1
Hypothetical protein.
  
     0.765
AIG79162.1
Two-component system response regulator.
 
     0.764
AIG78525.1
Hypothetical protein.
 
     0.759
AIG76287.1
Hypothetical protein.
  
     0.746
AIG76294.1
Hypothetical protein.
  
     0.707
AIG74294.1
Hypothetical protein.
 
     0.651
AIG75276.1
Hypothetical protein.
  
     0.638
AIG74906.1
Hypothetical protein.
 
     0.552
AIG78614.1
Transcriptional regulator.
  
     0.457
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.