STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB33301.1N-terminal ig-like domain of cellulase. (610 aa)    
Predicted Functional Partners:
SEB33292.1
Hypothetical protein; Belongs to the LOG family.
       0.773
SEB33296.1
Hypothetical protein; Belongs to the LOG family.
       0.773
SED61315.1
Cellulose binding domain-containing protein.
    
 0.769
SEB28871.1
Hypothetical protein.
  
     0.727
SEC56742.1
Cellulase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.687
SED42426.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.687
SEB28879.1
Hypothetical protein.
  
     0.683
SEC70163.1
Endoglucanase.
    
 0.677
SED55705.1
Endoglucanase.
    
 0.677
SEB33304.1
Transcriptional regulator, contains XRE-family HTH domain.
 
     0.661
Your Current Organism:
Amycolatopsis tolypomycina
NCBI taxonomy Id: 208445
Other names: A. tolypomycina, ATCC 21177, Amycolatopsis tolypomycina Wink et al. 2003, Amycolatopsis tolypophora, Amycolatopsis tolypophorous, DSM 44544, IFO 14664, IMSNU 20061, JCM 4936, NBRC 14664, NRRL B-24205, Streptomyces tolypophorus
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