Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB32197.1 | SEB41540.1 | SAMN04489727_0422 | SAMN04489727_1547 | Hypothetical protein. | Putative NADH-flavin reductase. | 0.505 |
SEB32197.1 | arcA | SAMN04489727_0422 | SAMN04489727_1613 | Hypothetical protein. | Arginine deiminase. | 0.483 |
SEB41530.1 | SEB41540.1 | SAMN04489727_1546 | SAMN04489727_1547 | Hypothetical protein. | Putative NADH-flavin reductase. | 0.776 |
SEB41530.1 | SEB41551.1 | SAMN04489727_1546 | SAMN04489727_1548 | Hypothetical protein. | Ribose-phosphate pyrophosphokinase. | 0.759 |
SEB41540.1 | SEB32197.1 | SAMN04489727_1547 | SAMN04489727_0422 | Putative NADH-flavin reductase. | Hypothetical protein. | 0.505 |
SEB41540.1 | SEB41530.1 | SAMN04489727_1547 | SAMN04489727_1546 | Putative NADH-flavin reductase. | Hypothetical protein. | 0.776 |
SEB41540.1 | SEB41551.1 | SAMN04489727_1547 | SAMN04489727_1548 | Putative NADH-flavin reductase. | Ribose-phosphate pyrophosphokinase. | 0.776 |
SEB41540.1 | SEC87825.1 | SAMN04489727_1547 | SAMN04489727_5433 | Putative NADH-flavin reductase. | Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family. | 0.780 |
SEB41540.1 | SED03564.1 | SAMN04489727_1547 | SAMN04489727_6107 | Putative NADH-flavin reductase. | Hypothetical protein. | 0.499 |
SEB41540.1 | SED05067.1 | SAMN04489727_1547 | SAMN04489727_6182 | Putative NADH-flavin reductase. | Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family. | 0.752 |
SEB41540.1 | SED28725.1 | SAMN04489727_1547 | SAMN04489727_7254 | Putative NADH-flavin reductase. | Hypothetical protein. | 0.499 |
SEB41540.1 | SED58676.1 | SAMN04489727_1547 | SAMN04489727_8477 | Putative NADH-flavin reductase. | Type I restriction enzyme, R subunit. | 0.450 |
SEB41540.1 | SED67859.1 | SAMN04489727_1547 | SAMN04489727_8867 | Putative NADH-flavin reductase. | ATP-dependent DNA helicase RecG. | 0.495 |
SEB41540.1 | arcA | SAMN04489727_1547 | SAMN04489727_1613 | Putative NADH-flavin reductase. | Arginine deiminase. | 0.497 |
SEB41551.1 | SEB41530.1 | SAMN04489727_1548 | SAMN04489727_1546 | Ribose-phosphate pyrophosphokinase. | Hypothetical protein. | 0.759 |
SEB41551.1 | SEB41540.1 | SAMN04489727_1548 | SAMN04489727_1547 | Ribose-phosphate pyrophosphokinase. | Putative NADH-flavin reductase. | 0.776 |
SEC87825.1 | SEB41540.1 | SAMN04489727_5433 | SAMN04489727_1547 | Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family. | Putative NADH-flavin reductase. | 0.780 |
SEC87825.1 | SED05067.1 | SAMN04489727_5433 | SAMN04489727_6182 | Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family. | Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family. | 0.909 |
SED03564.1 | SEB41540.1 | SAMN04489727_6107 | SAMN04489727_1547 | Hypothetical protein. | Putative NADH-flavin reductase. | 0.499 |
SED03564.1 | SED58676.1 | SAMN04489727_6107 | SAMN04489727_8477 | Hypothetical protein. | Type I restriction enzyme, R subunit. | 0.437 |
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