STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB42866.1DNA-binding transcriptional regulator, AcrR family. (202 aa)    
Predicted Functional Partners:
SEB42880.1
SnoaL-like domain-containing protein.
       0.780
SEB42854.1
L-2-hydroxyglutarate oxidase.
       0.554
SEC99875.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.543
SEB39616.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.533
SED66213.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.403
Your Current Organism:
Amycolatopsis tolypomycina
NCBI taxonomy Id: 208445
Other names: A. tolypomycina, ATCC 21177, Amycolatopsis tolypomycina Wink et al. 2003, Amycolatopsis tolypophora, Amycolatopsis tolypophorous, DSM 44544, IFO 14664, IMSNU 20061, JCM 4936, NBRC 14664, NRRL B-24205, Streptomyces tolypophorus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.