STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC73788.1Putative ABC transport system ATP-binding protein. (556 aa)    
Predicted Functional Partners:
SEC73771.1
ATP-binding cassette, subfamily C.
 
    
0.850
SEB30107.1
Rifamycin polyketide synthase modules 1, 2 and 3.
   
 0.733
SEB46956.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain; Manually curated.
 
 
 
0.728
SEC81679.1
Polyketide synthase 5.
   
 0.697
SEC73820.1
Hypothetical protein.
  
  0.651
SEB42497.1
ATP-binding cassette, subfamily C, CydCD.
  
 
 
0.620
SEC62467.1
ATP-binding cassette, subfamily C, CydCD.
  
 
 
0.620
SEC52351.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
  
 
0.588
SEB32989.1
Adenylyltransferase and sulfurtransferase.
  
 0.583
SEB33275.1
ATP-binding cassette, subfamily C, CydD.
 
  
 
0.582
Your Current Organism:
Amycolatopsis tolypomycina
NCBI taxonomy Id: 208445
Other names: A. tolypomycina, ATCC 21177, Amycolatopsis tolypomycina Wink et al. 2003, Amycolatopsis tolypophora, Amycolatopsis tolypophorous, DSM 44544, IFO 14664, IMSNU 20061, JCM 4936, NBRC 14664, NRRL B-24205, Streptomyces tolypophorus
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