STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC76347.1Signal transduction histidine kinase. (351 aa)    
Predicted Functional Partners:
SEC76374.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.964
SEC23147.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.833
SEC80726.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.831
SED33181.1
Signal transduction histidine kinase; Manually curated.
  
 0.821
SEC96025.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.817
SEC72678.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.816
SEC72398.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.814
SEB39070.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.811
SED80210.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.810
SED05516.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.807
Your Current Organism:
Amycolatopsis tolypomycina
NCBI taxonomy Id: 208445
Other names: A. tolypomycina, ATCC 21177, Amycolatopsis tolypomycina Wink et al. 2003, Amycolatopsis tolypophora, Amycolatopsis tolypophorous, DSM 44544, IFO 14664, IMSNU 20061, JCM 4936, NBRC 14664, NRRL B-24205, Streptomyces tolypophorus
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