STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (499 aa)    
Predicted Functional Partners:
araB
L-ribulokinase.
 
 
 0.999
SEC91223.1
L-ribulose 5-phosphate 4-epimerase.
 
 
 0.995
SED45458.1
alpha-N-arabinofuranosidase.
 
 
 0.949
SEC99245.1
L-fuculose-phosphate aldolase.
 
 
 0.944
SED76159.1
L-fuculose 1-phosphate aldolase.
 
 
 0.944
SED26526.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.917
SEC91273.1
Concanavalin A-like lectin/glucanases superfamily protein.
 
 
 0.897
SED05414.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family.
 
  
 0.852
xylB
Xylulokinase.
 
 
 0.827
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
  
   
 0.821
Your Current Organism:
Amycolatopsis tolypomycina
NCBI taxonomy Id: 208445
Other names: A. tolypomycina, ATCC 21177, Amycolatopsis tolypomycina Wink et al. 2003, Amycolatopsis tolypophora, Amycolatopsis tolypophorous, DSM 44544, IFO 14664, IMSNU 20061, JCM 4936, NBRC 14664, NRRL B-24205, Streptomyces tolypophorus
Server load: low (22%) [HD]