Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB29565.1 | SEC17727.1 | SAMN04489727_0182 | SAMN04489727_2841 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.403 |
SEB29565.1 | SEC22923.1 | SAMN04489727_0182 | SAMN04489727_3027 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADPH/NADH) large chain. | 0.965 |
SEB29565.1 | SEC99291.1 | SAMN04489727_0182 | SAMN04489727_5902 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | ferredoxin--NADP+ reductase. | 0.995 |
SEB29565.1 | SED03433.1 | SAMN04489727_0182 | SAMN04489727_6101 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | L-lactate dehydrogenase complex protein LldF. | 0.899 |
SEB29565.1 | SED03458.1 | SAMN04489727_0182 | SAMN04489727_6102 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | L-lactate dehydrogenase complex protein LldE. | 0.715 |
SEB29565.1 | SED39811.1 | SAMN04489727_0182 | SAMN04489727_7707 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | FAD/FMN-containing dehydrogenase. | 0.909 |
SEB29565.1 | SED40154.1 | SAMN04489727_0182 | SAMN04489727_7722 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADPH/NADH) large chain. | 0.965 |
SEC17727.1 | SEB29565.1 | SAMN04489727_2841 | SAMN04489727_0182 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.403 |
SEC17727.1 | SED03415.1 | SAMN04489727_2841 | SAMN04489727_6100 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | L-lactate dehydrogenase complex protein LldG. | 0.594 |
SEC17727.1 | SED03433.1 | SAMN04489727_2841 | SAMN04489727_6101 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | L-lactate dehydrogenase complex protein LldF. | 0.810 |
SEC17727.1 | SED03458.1 | SAMN04489727_2841 | SAMN04489727_6102 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | L-lactate dehydrogenase complex protein LldE. | 0.604 |
SEC17727.1 | SED39811.1 | SAMN04489727_2841 | SAMN04489727_7707 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | FAD/FMN-containing dehydrogenase. | 0.642 |
SEC22923.1 | SEB29565.1 | SAMN04489727_3027 | SAMN04489727_0182 | Glutamate synthase (NADPH/NADH) large chain. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.965 |
SEC22923.1 | SEC99291.1 | SAMN04489727_3027 | SAMN04489727_5902 | Glutamate synthase (NADPH/NADH) large chain. | ferredoxin--NADP+ reductase. | 0.999 |
SEC22923.1 | SED03433.1 | SAMN04489727_3027 | SAMN04489727_6101 | Glutamate synthase (NADPH/NADH) large chain. | L-lactate dehydrogenase complex protein LldF. | 0.806 |
SEC22923.1 | SED03458.1 | SAMN04489727_3027 | SAMN04489727_6102 | Glutamate synthase (NADPH/NADH) large chain. | L-lactate dehydrogenase complex protein LldE. | 0.828 |
SEC22923.1 | SED39811.1 | SAMN04489727_3027 | SAMN04489727_7707 | Glutamate synthase (NADPH/NADH) large chain. | FAD/FMN-containing dehydrogenase. | 0.967 |
SEC22923.1 | SED40154.1 | SAMN04489727_3027 | SAMN04489727_7722 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate synthase (NADPH/NADH) large chain. | 0.999 |
SEC22923.1 | gcvP | SAMN04489727_3027 | SAMN04489727_2548 | Glutamate synthase (NADPH/NADH) large chain. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.983 |
SEC22923.1 | gcvP-2 | SAMN04489727_3027 | SAMN04489727_4943 | Glutamate synthase (NADPH/NADH) large chain. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.983 |
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