Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB32989.1 | SEC05062.1 | SAMN04489727_0646 | SAMN04489727_2372 | Adenylyltransferase and sulfurtransferase. | Cysteine desulfurase. | 0.977 |
SEB32989.1 | SEC39129.1 | SAMN04489727_0646 | SAMN04489727_3585 | Adenylyltransferase and sulfurtransferase. | Nitrogen fixation protein NifU. | 0.706 |
SEB32989.1 | SEC70615.1 | SAMN04489727_0646 | SAMN04489727_4767 | Adenylyltransferase and sulfurtransferase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.634 |
SEB32989.1 | SEC76952.1 | SAMN04489727_0646 | SAMN04489727_5015 | Adenylyltransferase and sulfurtransferase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.634 |
SEB32989.1 | SED10830.1 | SAMN04489727_0646 | SAMN04489727_6447 | Adenylyltransferase and sulfurtransferase. | Selenocysteine lyase/Cysteine desulfurase. | 0.670 |
SEC05062.1 | SEB32989.1 | SAMN04489727_2372 | SAMN04489727_0646 | Cysteine desulfurase. | Adenylyltransferase and sulfurtransferase. | 0.977 |
SEC05062.1 | SEC39030.1 | SAMN04489727_2372 | SAMN04489727_3581 | Cysteine desulfurase. | Iron-regulated ABC transporter membrane component SufB. | 0.663 |
SEC05062.1 | SEC39055.1 | SAMN04489727_2372 | SAMN04489727_3582 | Cysteine desulfurase. | Iron-regulated ABC transporter permease protein SufD. | 0.663 |
SEC05062.1 | SEC39084.1 | SAMN04489727_2372 | SAMN04489727_3583 | Cysteine desulfurase. | Fe-S cluster assembly ATP-binding protein. | 0.713 |
SEC05062.1 | SEC39129.1 | SAMN04489727_2372 | SAMN04489727_3585 | Cysteine desulfurase. | Nitrogen fixation protein NifU. | 0.999 |
SEC05062.1 | SED10830.1 | SAMN04489727_2372 | SAMN04489727_6447 | Cysteine desulfurase. | Selenocysteine lyase/Cysteine desulfurase. | 0.646 |
SEC25139.1 | SED10830.1 | SAMN04489727_3100 | SAMN04489727_6447 | Jacalin-like lectin domain-containing protein. | Selenocysteine lyase/Cysteine desulfurase. | 0.625 |
SEC39030.1 | SEC05062.1 | SAMN04489727_3581 | SAMN04489727_2372 | Iron-regulated ABC transporter membrane component SufB. | Cysteine desulfurase. | 0.663 |
SEC39030.1 | SEC39055.1 | SAMN04489727_3581 | SAMN04489727_3582 | Iron-regulated ABC transporter membrane component SufB. | Iron-regulated ABC transporter permease protein SufD. | 0.944 |
SEC39030.1 | SEC39084.1 | SAMN04489727_3581 | SAMN04489727_3583 | Iron-regulated ABC transporter membrane component SufB. | Fe-S cluster assembly ATP-binding protein. | 0.999 |
SEC39030.1 | SEC39129.1 | SAMN04489727_3581 | SAMN04489727_3585 | Iron-regulated ABC transporter membrane component SufB. | Nitrogen fixation protein NifU. | 0.985 |
SEC39030.1 | SED10830.1 | SAMN04489727_3581 | SAMN04489727_6447 | Iron-regulated ABC transporter membrane component SufB. | Selenocysteine lyase/Cysteine desulfurase. | 0.749 |
SEC39055.1 | SEC05062.1 | SAMN04489727_3582 | SAMN04489727_2372 | Iron-regulated ABC transporter permease protein SufD. | Cysteine desulfurase. | 0.663 |
SEC39055.1 | SEC39030.1 | SAMN04489727_3582 | SAMN04489727_3581 | Iron-regulated ABC transporter permease protein SufD. | Iron-regulated ABC transporter membrane component SufB. | 0.944 |
SEC39055.1 | SEC39084.1 | SAMN04489727_3582 | SAMN04489727_3583 | Iron-regulated ABC transporter permease protein SufD. | Fe-S cluster assembly ATP-binding protein. | 0.999 |
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