Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEC75811.1 | SED13236.1 | SAMN04489727_4970 | SAMN04489727_6556 | Putative Mg2+ transporter-C (MgtC) family protein. | Mg2+-importing ATPase. | 0.694 |
SED13236.1 | SEC75811.1 | SAMN04489727_6556 | SAMN04489727_4970 | Mg2+-importing ATPase. | Putative Mg2+ transporter-C (MgtC) family protein. | 0.694 |
SED13236.1 | SED13247.1 | SAMN04489727_6556 | SAMN04489727_6557 | Mg2+-importing ATPase. | NitT/TauT family transport system permease protein. | 0.678 |
SED13236.1 | SED13277.1 | SAMN04489727_6556 | SAMN04489727_6558 | Mg2+-importing ATPase. | NitT/TauT family transport system ATP-binding protein. | 0.613 |
SED13236.1 | SED21046.1 | SAMN04489727_6556 | SAMN04489727_6901 | Mg2+-importing ATPase. | Ca2+-binding protein, EF-hand superfamily. | 0.638 |
SED13236.1 | SED36129.1 | SAMN04489727_6556 | SAMN04489727_7561 | Mg2+-importing ATPase. | Putative Mg2+ transporter-C (MgtC) family protein. | 0.670 |
SED13236.1 | adk | SAMN04489727_6556 | SAMN04489727_1056 | Mg2+-importing ATPase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.646 |
SED13236.1 | atpA | SAMN04489727_6556 | SAMN04489727_8226 | Mg2+-importing ATPase. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.593 |
SED13236.1 | atpD | SAMN04489727_6556 | SAMN04489727_8224 | Mg2+-importing ATPase. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.644 |
SED13236.1 | atpG | SAMN04489727_6556 | SAMN04489727_8225 | Mg2+-importing ATPase. | ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.594 |
SED13236.1 | atpH | SAMN04489727_6556 | SAMN04489727_8227 | Mg2+-importing ATPase. | ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.604 |
SED13247.1 | SED13236.1 | SAMN04489727_6557 | SAMN04489727_6556 | NitT/TauT family transport system permease protein. | Mg2+-importing ATPase. | 0.678 |
SED13247.1 | SED13277.1 | SAMN04489727_6557 | SAMN04489727_6558 | NitT/TauT family transport system permease protein. | NitT/TauT family transport system ATP-binding protein. | 0.966 |
SED13277.1 | SED13236.1 | SAMN04489727_6558 | SAMN04489727_6556 | NitT/TauT family transport system ATP-binding protein. | Mg2+-importing ATPase. | 0.613 |
SED13277.1 | SED13247.1 | SAMN04489727_6558 | SAMN04489727_6557 | NitT/TauT family transport system ATP-binding protein. | NitT/TauT family transport system permease protein. | 0.966 |
SED21046.1 | SED13236.1 | SAMN04489727_6901 | SAMN04489727_6556 | Ca2+-binding protein, EF-hand superfamily. | Mg2+-importing ATPase. | 0.638 |
SED21046.1 | adk | SAMN04489727_6901 | SAMN04489727_1056 | Ca2+-binding protein, EF-hand superfamily. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.771 |
SED36129.1 | SED13236.1 | SAMN04489727_7561 | SAMN04489727_6556 | Putative Mg2+ transporter-C (MgtC) family protein. | Mg2+-importing ATPase. | 0.670 |
adk | SED13236.1 | SAMN04489727_1056 | SAMN04489727_6556 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Mg2+-importing ATPase. | 0.646 |
adk | SED21046.1 | SAMN04489727_1056 | SAMN04489727_6901 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Ca2+-binding protein, EF-hand superfamily. | 0.771 |
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