STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED15917.1Anti-sigma regulatory factor (Ser/Thr protein kinase). (159 aa)    
Predicted Functional Partners:
SED15769.1
Anti-anti-sigma factor.
  
  0.831
SED15749.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.811
SEC51823.1
Anti-anti-sigma factor.
  
  0.791
SED27362.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.782
SEC47411.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.730
SED15831.1
PAS domain S-box-containing protein.
 
0.712
SED15858.1
Anti-anti-sigma factor.
  
  0.689
SED43446.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.686
SED48197.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.676
SEC97034.1
Anti-anti-sigma factor.
  
  0.670
Your Current Organism:
Amycolatopsis tolypomycina
NCBI taxonomy Id: 208445
Other names: A. tolypomycina, ATCC 21177, Amycolatopsis tolypomycina Wink et al. 2003, Amycolatopsis tolypophora, Amycolatopsis tolypophorous, DSM 44544, IFO 14664, IMSNU 20061, JCM 4936, NBRC 14664, NRRL B-24205, Streptomyces tolypophorus
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