Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SED25281.1 | SED25304.1 | SAMN04489727_7095 | SAMN04489727_7096 | Polyketide cyclase / dehydrase and lipid transport. | DNA-binding transcriptional regulator, AcrR family. | 0.594 |
SED25281.1 | SED25326.1 | SAMN04489727_7095 | SAMN04489727_7097 | Polyketide cyclase / dehydrase and lipid transport. | X-Pro dipeptidyl-peptidase. | 0.566 |
SED25281.1 | SED25349.1 | SAMN04489727_7095 | SAMN04489727_7098 | Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein. | 0.419 |
SED25281.1 | SED25368.1 | SAMN04489727_7095 | SAMN04489727_7099 | Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein. | 0.416 |
SED25304.1 | SED25281.1 | SAMN04489727_7096 | SAMN04489727_7095 | DNA-binding transcriptional regulator, AcrR family. | Polyketide cyclase / dehydrase and lipid transport. | 0.594 |
SED25304.1 | SED25326.1 | SAMN04489727_7096 | SAMN04489727_7097 | DNA-binding transcriptional regulator, AcrR family. | X-Pro dipeptidyl-peptidase. | 0.746 |
SED25304.1 | SED25349.1 | SAMN04489727_7096 | SAMN04489727_7098 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.555 |
SED25304.1 | SED25368.1 | SAMN04489727_7096 | SAMN04489727_7099 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.555 |
SED25304.1 | SED25395.1 | SAMN04489727_7096 | SAMN04489727_7100 | DNA-binding transcriptional regulator, AcrR family. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.458 |
SED25304.1 | SED25426.1 | SAMN04489727_7096 | SAMN04489727_7101 | DNA-binding transcriptional regulator, AcrR family. | Signal transduction histidine kinase. | 0.458 |
SED25304.1 | SED25446.1 | SAMN04489727_7096 | SAMN04489727_7102 | DNA-binding transcriptional regulator, AcrR family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.404 |
SED25326.1 | SED25281.1 | SAMN04489727_7097 | SAMN04489727_7095 | X-Pro dipeptidyl-peptidase. | Polyketide cyclase / dehydrase and lipid transport. | 0.566 |
SED25326.1 | SED25304.1 | SAMN04489727_7097 | SAMN04489727_7096 | X-Pro dipeptidyl-peptidase. | DNA-binding transcriptional regulator, AcrR family. | 0.746 |
SED25326.1 | SED25349.1 | SAMN04489727_7097 | SAMN04489727_7098 | X-Pro dipeptidyl-peptidase. | Hypothetical protein. | 0.576 |
SED25326.1 | SED25368.1 | SAMN04489727_7097 | SAMN04489727_7099 | X-Pro dipeptidyl-peptidase. | Hypothetical protein. | 0.574 |
SED25326.1 | SED25395.1 | SAMN04489727_7097 | SAMN04489727_7100 | X-Pro dipeptidyl-peptidase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.472 |
SED25326.1 | SED25426.1 | SAMN04489727_7097 | SAMN04489727_7101 | X-Pro dipeptidyl-peptidase. | Signal transduction histidine kinase. | 0.472 |
SED25349.1 | SED25281.1 | SAMN04489727_7098 | SAMN04489727_7095 | Hypothetical protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.419 |
SED25349.1 | SED25304.1 | SAMN04489727_7098 | SAMN04489727_7096 | Hypothetical protein. | DNA-binding transcriptional regulator, AcrR family. | 0.555 |
SED25349.1 | SED25326.1 | SAMN04489727_7098 | SAMN04489727_7097 | Hypothetical protein. | X-Pro dipeptidyl-peptidase. | 0.576 |
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