STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED49048.1Predicted oxidoreductase. (321 aa)    
Predicted Functional Partners:
SED49022.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
       0.786
SEC46115.1
D-threo-aldose 1-dehydrogenase.
  
     0.677
SEC45540.1
Predicted oxidoreductase.
  
     0.667
SEB29130.1
Predicted oxidoreductase.
  
     0.657
SED48992.1
Acyl transferase domain-containing protein.
  
 
  0.534
SED48884.1
UDP:flavonoid glycosyltransferase YjiC, YdhE family.
       0.490
SED48919.1
Lysophospholipase, alpha-beta hydrolase superfamily.
       0.490
SED48948.1
Acyl carrier protein.
       0.490
SED48980.1
Acyl transferase domain-containing protein.
       0.490
SEB33764.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.436
Your Current Organism:
Amycolatopsis tolypomycina
NCBI taxonomy Id: 208445
Other names: A. tolypomycina, ATCC 21177, Amycolatopsis tolypomycina Wink et al. 2003, Amycolatopsis tolypophora, Amycolatopsis tolypophorous, DSM 44544, IFO 14664, IMSNU 20061, JCM 4936, NBRC 14664, NRRL B-24205, Streptomyces tolypophorus
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