STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ73645.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (220 aa)    
Predicted Functional Partners:
SDZ73625.1
Histidine kinase.
 
  0.969
SEA67865.1
Signal transduction histidine kinase.
 
 0.904
SDZ87149.1
Signal transduction histidine kinase.
  0.898
SEA30085.1
Signal transduction histidine kinase.
  
  0.888
SEA72454.1
Signal transduction histidine kinase.
  0.885
SEA31381.1
Signal transduction histidine kinase.
  0.875
SDZ78537.1
Histidine kinase.
 
  0.742
SEA15416.1
Phage shock protein C (PspC) family protein.
 
   0.599
SEA54253.1
GAF domain-containing protein.
   
  0.595
SDZ74320.1
Two-component system, OmpR family, sensor kinase.
  
 
  0.583
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.