Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ73802.1 | SDZ73816.1 | SAMN02910418_00044 | SAMN02910418_00045 | Pyruvate formate lyase activating enzyme. | Hypothetical protein. | 0.910 |
SDZ73802.1 | SDZ73837.1 | SAMN02910418_00044 | SAMN02910418_00046 | Pyruvate formate lyase activating enzyme. | 2'-5' RNA ligase. | 0.448 |
SDZ73816.1 | SDZ73802.1 | SAMN02910418_00045 | SAMN02910418_00044 | Hypothetical protein. | Pyruvate formate lyase activating enzyme. | 0.910 |
SDZ73816.1 | SDZ73837.1 | SAMN02910418_00045 | SAMN02910418_00046 | Hypothetical protein. | 2'-5' RNA ligase. | 0.707 |
SDZ73816.1 | SDZ73854.1 | SAMN02910418_00045 | SAMN02910418_00047 | Hypothetical protein. | Hypothetical protein. | 0.444 |
SDZ73816.1 | SDZ76505.1 | SAMN02910418_00045 | SAMN02910418_00167 | Hypothetical protein. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.480 |
SDZ73816.1 | SDZ81240.1 | SAMN02910418_00045 | SAMN02910418_00257 | Hypothetical protein. | Competence protein ComEC. | 0.435 |
SDZ73816.1 | SEA01851.1 | SAMN02910418_00045 | SAMN02910418_00716 | Hypothetical protein. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.592 |
SDZ73816.1 | SEA13697.1 | SAMN02910418_00045 | SAMN02910418_00962 | Hypothetical protein. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region. | 0.723 |
SDZ73816.1 | panC | SAMN02910418_00045 | SAMN02910418_00626 | Hypothetical protein. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.435 |
SDZ73816.1 | pyrC | SAMN02910418_00045 | SAMN02910418_01478 | Hypothetical protein. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.436 |
SDZ73816.1 | rpoA | SAMN02910418_00045 | SAMN02910418_00948 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.437 |
SDZ73837.1 | SDZ73802.1 | SAMN02910418_00046 | SAMN02910418_00044 | 2'-5' RNA ligase. | Pyruvate formate lyase activating enzyme. | 0.448 |
SDZ73837.1 | SDZ73816.1 | SAMN02910418_00046 | SAMN02910418_00045 | 2'-5' RNA ligase. | Hypothetical protein. | 0.707 |
SDZ73837.1 | SDZ73854.1 | SAMN02910418_00046 | SAMN02910418_00047 | 2'-5' RNA ligase. | Hypothetical protein. | 0.509 |
SDZ73854.1 | SDZ73816.1 | SAMN02910418_00047 | SAMN02910418_00045 | Hypothetical protein. | Hypothetical protein. | 0.444 |
SDZ73854.1 | SDZ73837.1 | SAMN02910418_00047 | SAMN02910418_00046 | Hypothetical protein. | 2'-5' RNA ligase. | 0.509 |
SDZ76505.1 | SDZ73816.1 | SAMN02910418_00167 | SAMN02910418_00045 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Hypothetical protein. | 0.480 |
SDZ76505.1 | SEA13697.1 | SAMN02910418_00167 | SAMN02910418_00962 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region. | 0.530 |
SDZ81240.1 | SDZ73816.1 | SAMN02910418_00257 | SAMN02910418_00045 | Competence protein ComEC. | Hypothetical protein. | 0.435 |
page 1 of 2