Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ83229.1 | SDZ83258.1 | SAMN02910418_00328 | SAMN02910418_00329 | Osmoprotectant transport system substrate-binding protein. | Osmoprotectant transport system permease protein. | 0.999 |
SDZ83229.1 | SDZ83346.1 | SAMN02910418_00328 | SAMN02910418_00332 | Osmoprotectant transport system substrate-binding protein. | Acetamidase/formamidase. | 0.572 |
SDZ83229.1 | SDZ83373.1 | SAMN02910418_00328 | SAMN02910418_00333 | Osmoprotectant transport system substrate-binding protein. | Hypothetical protein. | 0.455 |
SDZ83258.1 | SDZ83229.1 | SAMN02910418_00329 | SAMN02910418_00328 | Osmoprotectant transport system permease protein. | Osmoprotectant transport system substrate-binding protein. | 0.999 |
SDZ83258.1 | SDZ83346.1 | SAMN02910418_00329 | SAMN02910418_00332 | Osmoprotectant transport system permease protein. | Acetamidase/formamidase. | 0.572 |
SDZ83258.1 | SDZ83373.1 | SAMN02910418_00329 | SAMN02910418_00333 | Osmoprotectant transport system permease protein. | Hypothetical protein. | 0.455 |
SDZ83346.1 | SDZ83229.1 | SAMN02910418_00332 | SAMN02910418_00328 | Acetamidase/formamidase. | Osmoprotectant transport system substrate-binding protein. | 0.572 |
SDZ83346.1 | SDZ83258.1 | SAMN02910418_00332 | SAMN02910418_00329 | Acetamidase/formamidase. | Osmoprotectant transport system permease protein. | 0.572 |
SDZ83346.1 | SDZ83373.1 | SAMN02910418_00332 | SAMN02910418_00333 | Acetamidase/formamidase. | Hypothetical protein. | 0.603 |
SDZ83346.1 | SEA04773.1 | SAMN02910418_00332 | SAMN02910418_00810 | Acetamidase/formamidase. | Amidase. | 0.747 |
SDZ83346.1 | SEA14690.1 | SAMN02910418_00332 | SAMN02910418_00988 | Acetamidase/formamidase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.767 |
SDZ83346.1 | SEA24799.1 | SAMN02910418_00332 | SAMN02910418_01205 | Acetamidase/formamidase. | Amidase; Belongs to the amidase family. | 0.747 |
SDZ83346.1 | SEA25198.1 | SAMN02910418_00332 | SAMN02910418_01219 | Acetamidase/formamidase. | Aldehyde dehydrogenase family protein. | 0.711 |
SDZ83346.1 | SEA55647.1 | SAMN02910418_00332 | SAMN02910418_01883 | Acetamidase/formamidase. | Phosphoenolpyruvate carboxylase, type 1. | 0.762 |
SDZ83346.1 | SEA74123.1 | SAMN02910418_00332 | SAMN02910418_02301 | Acetamidase/formamidase. | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.711 |
SDZ83346.1 | SEA74201.1 | SAMN02910418_00332 | SAMN02910418_02304 | Acetamidase/formamidase. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 0.711 |
SDZ83373.1 | SDZ83229.1 | SAMN02910418_00333 | SAMN02910418_00328 | Hypothetical protein. | Osmoprotectant transport system substrate-binding protein. | 0.455 |
SDZ83373.1 | SDZ83258.1 | SAMN02910418_00333 | SAMN02910418_00329 | Hypothetical protein. | Osmoprotectant transport system permease protein. | 0.455 |
SDZ83373.1 | SDZ83346.1 | SAMN02910418_00333 | SAMN02910418_00332 | Hypothetical protein. | Acetamidase/formamidase. | 0.603 |
SEA04773.1 | SDZ83346.1 | SAMN02910418_00810 | SAMN02910418_00332 | Amidase. | Acetamidase/formamidase. | 0.747 |
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