STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ84011.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
SDZ84041.1
Hypothetical protein.
 
     0.860
SDZ84062.1
Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.788
SEA52543.1
Predicted phosphohydrolase, MPP superfamily.
  
     0.769
SDZ82877.1
Hypothetical protein.
  
     0.766
SDZ77057.1
Hypothetical protein.
  
     0.747
SEA24123.1
Histidine kinase-like ATPase domain-containing protein.
  
     0.726
SEA16415.1
Acetyltransferase (GNAT) family protein.
  
     0.722
SEA02574.1
Hypothetical protein.
  
     0.720
SEA68311.1
CYTH domain-containing protein.
  
     0.709
SDZ81796.1
Alpha/beta hydrolase family protein.
  
     0.679
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.