STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ91472.1TadE-like protein. (122 aa)    
Predicted Functional Partners:
SDZ91439.1
Protein of unknown function.
       0.838
SDZ91508.1
Helicase/secretion neighborhood TadE-like protein.
       0.773
SDZ91405.1
Tight adherence protein B.
       0.644
SDZ93880.1
Hypothetical protein.
  
     0.559
SDZ91366.1
Pilus assembly protein CpaF.
       0.552
SDZ91330.1
Hypothetical protein.
       0.539
SEA54708.1
Protein of unknown function.
  
     0.479
SEA48147.1
Spore maturation protein CgeB.
  
     0.463
SDZ76557.1
Lysophospholipase L1.
  
     0.447
SDZ91292.1
HAD-superfamily subfamily IB hydrolase, TIGR01490.
       0.442
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.