Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ84801.1 | SDZ91755.1 | SAMN02910418_00384 | SAMN02910418_00531 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | N-acetylmuramoyl-L-alanine amidase. | 0.871 |
SDZ84801.1 | SEA62464.1 | SAMN02910418_00384 | SAMN02910418_02021 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Membrane carboxypeptidase (penicillin-binding protein). | 0.661 |
SDZ91643.1 | SDZ91680.1 | SAMN02910418_00528 | SAMN02910418_00529 | Ribonucleoside-triphosphate reductase class III catalytic subunit. | Pyruvate formate lyase activating enzyme. | 0.956 |
SDZ91643.1 | SDZ91720.1 | SAMN02910418_00528 | SAMN02910418_00530 | Ribonucleoside-triphosphate reductase class III catalytic subunit. | Hypothetical protein. | 0.520 |
SDZ91643.1 | SDZ91755.1 | SAMN02910418_00528 | SAMN02910418_00531 | Ribonucleoside-triphosphate reductase class III catalytic subunit. | N-acetylmuramoyl-L-alanine amidase. | 0.525 |
SDZ91643.1 | SDZ91869.1 | SAMN02910418_00528 | SAMN02910418_00534 | Ribonucleoside-triphosphate reductase class III catalytic subunit. | TPR repeat-containing protein. | 0.557 |
SDZ91680.1 | SDZ91643.1 | SAMN02910418_00529 | SAMN02910418_00528 | Pyruvate formate lyase activating enzyme. | Ribonucleoside-triphosphate reductase class III catalytic subunit. | 0.956 |
SDZ91680.1 | SDZ91720.1 | SAMN02910418_00529 | SAMN02910418_00530 | Pyruvate formate lyase activating enzyme. | Hypothetical protein. | 0.520 |
SDZ91680.1 | SDZ91755.1 | SAMN02910418_00529 | SAMN02910418_00531 | Pyruvate formate lyase activating enzyme. | N-acetylmuramoyl-L-alanine amidase. | 0.520 |
SDZ91720.1 | SDZ91643.1 | SAMN02910418_00530 | SAMN02910418_00528 | Hypothetical protein. | Ribonucleoside-triphosphate reductase class III catalytic subunit. | 0.520 |
SDZ91720.1 | SDZ91680.1 | SAMN02910418_00530 | SAMN02910418_00529 | Hypothetical protein. | Pyruvate formate lyase activating enzyme. | 0.520 |
SDZ91720.1 | SDZ91755.1 | SAMN02910418_00530 | SAMN02910418_00531 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.774 |
SDZ91720.1 | SDZ91795.1 | SAMN02910418_00530 | SAMN02910418_00532 | Hypothetical protein. | Cytochrome c nitrite reductase small subunit. | 0.510 |
SDZ91720.1 | SDZ91869.1 | SAMN02910418_00530 | SAMN02910418_00534 | Hypothetical protein. | TPR repeat-containing protein. | 0.944 |
SDZ91755.1 | SDZ84801.1 | SAMN02910418_00531 | SAMN02910418_00384 | N-acetylmuramoyl-L-alanine amidase. | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.871 |
SDZ91755.1 | SDZ91643.1 | SAMN02910418_00531 | SAMN02910418_00528 | N-acetylmuramoyl-L-alanine amidase. | Ribonucleoside-triphosphate reductase class III catalytic subunit. | 0.525 |
SDZ91755.1 | SDZ91680.1 | SAMN02910418_00531 | SAMN02910418_00529 | N-acetylmuramoyl-L-alanine amidase. | Pyruvate formate lyase activating enzyme. | 0.520 |
SDZ91755.1 | SDZ91720.1 | SAMN02910418_00531 | SAMN02910418_00530 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.774 |
SDZ91755.1 | SDZ91795.1 | SAMN02910418_00531 | SAMN02910418_00532 | N-acetylmuramoyl-L-alanine amidase. | Cytochrome c nitrite reductase small subunit. | 0.510 |
SDZ91755.1 | SDZ91869.1 | SAMN02910418_00531 | SAMN02910418_00534 | N-acetylmuramoyl-L-alanine amidase. | TPR repeat-containing protein. | 0.553 |
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