STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ91755.1N-acetylmuramoyl-L-alanine amidase. (272 aa)    
Predicted Functional Partners:
SDZ84801.1
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
    
 0.871
SEA51323.1
Membrane associated serine protease, rhomboid family.
  
   0.812
SEA53049.1
Membrane associated serine protease, rhomboid family.
  
   0.812
SDZ91720.1
Hypothetical protein.
       0.774
SDZ91869.1
TPR repeat-containing protein.
   
   0.553
SEA62464.1
Membrane carboxypeptidase (penicillin-binding protein).
   
 0.543
SDZ91643.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
  
    0.525
SEA44884.1
Cell division protein FtsW; Belongs to the SEDS family.
  
  
 0.521
SDZ91680.1
Pyruvate formate lyase activating enzyme.
       0.520
SDZ91795.1
Cytochrome c nitrite reductase small subunit.
       0.510
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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