STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ97317.1Dihydrolipoamide dehydrogenase. (470 aa)    
Predicted Functional Partners:
kgd
2-oxoglutarate dehydrogenase E1 component.
  
 0.999
SEA43481.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.994
SDZ97272.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  0.987
SDZ97170.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 
 0.986
SDZ83928.1
2-oxoglutarate dehydrogenase E2 component.
 0.981
SDZ97208.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.976
SEA03666.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  0.940
SDZ84915.1
Aminomethyltransferase.
 
 0.921
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.917
SEA43553.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  0.909
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.