STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA02086.1Thiamine transport system ATP-binding protein. (321 aa)    
Predicted Functional Partners:
SEA02163.1
Thiamine transport system substrate-binding protein.
 
  
  0.995
SEA02119.1
Thiamine transport system permease protein.
 
 
 0.993
SEA77906.1
iron(III) transport system permease protein.
 
 
 0.886
SEA77877.1
iron(III) transport system substrate-binding protein.
 
 
 0.876
SEA02056.1
Hypothetical protein.
       0.773
SEA22934.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.767
SEA06176.1
Molybdate transport system substrate-binding protein.
   
 0.751
SEA02192.1
Hypothetical protein.
       0.655
SEA05817.1
ABC-2 type transport system ATP-binding protein.
 
  
 
0.594
SEA55031.1
ABC transporter.
  
    0.561
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.