STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA02542.1Predicted arabinose efflux permease, MFS family. (448 aa)    
Predicted Functional Partners:
SEA02483.1
Iron (metal) dependent repressor, DtxR family.
       0.773
SEA02515.1
Fe-S oxidoreductase.
       0.773
SEA02314.1
Multicomponent Na+:H+ antiporter subunit F.
 
     0.615
SEA02344.1
Multicomponent Na+:H+ antiporter subunit E.
 
     0.612
SEA02287.1
Multicomponent Na+:H+ antiporter subunit G.
       0.553
SEA02377.1
Multisubunit sodium/proton antiporter, MrpD subunit.
       0.553
SEA02405.1
Multicomponent Na+:H+ antiporter subunit C.
       0.553
SEA02433.1
Multicomponent Na+:H+ antiporter subunit A.
       0.553
SEA02253.1
Protein of unknown function.
       0.471
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.