STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA04335.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
SEA04359.1
Hypothetical protein.
  
    0.990
SEA04384.1
Dye decolorizing peroxidase.
 
  
 0.968
SEA03490.1
Putative copper resistance protein D.
 
  
 0.878
SDZ95135.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
   0.876
SEA15229.1
Integral membrane protein.
  
    0.765
SEA04129.1
Copper chaperone CopZ.
     
 0.666
SEA04304.1
Hypothetical protein.
       0.655
SEA04157.1
Cu+-exporting ATPase.
     
 0.551
SEA04186.1
Conserved hypothetical protein.
       0.530
SEA04216.1
Predicted membrane protein.
       0.530
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.