node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ78096.1 | SDZ84600.1 | SAMN02910418_00230 | SAMN02910418_00377 | ATP-dependent DNA helicase, Rep family. | DNA polymerase-3 subunit epsilon. | 0.957 |
SDZ78096.1 | SEA15555.1 | SAMN02910418_00230 | SAMN02910418_01011 | ATP-dependent DNA helicase, Rep family. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.988 |
SDZ78096.1 | SEA17882.1 | SAMN02910418_00230 | SAMN02910418_01079 | ATP-dependent DNA helicase, Rep family. | Superfamily I DNA or RNA helicase. | 0.999 |
SDZ78096.1 | SEA17915.1 | SAMN02910418_00230 | SAMN02910418_01080 | ATP-dependent DNA helicase, Rep family. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.968 |
SDZ78096.1 | SEA45357.1 | SAMN02910418_00230 | SAMN02910418_01637 | ATP-dependent DNA helicase, Rep family. | DNA helicase IV. | 0.464 |
SDZ78096.1 | SEA63259.1 | SAMN02910418_00230 | SAMN02910418_02047 | ATP-dependent DNA helicase, Rep family. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.999 |
SDZ78096.1 | polA | SAMN02910418_00230 | SAMN02910418_01521 | ATP-dependent DNA helicase, Rep family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
SDZ78096.1 | recA | SAMN02910418_00230 | SAMN02910418_02381 | ATP-dependent DNA helicase, Rep family. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.999 |
SDZ78096.1 | uvrB | SAMN02910418_00230 | SAMN02910418_01515 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.864 |
SDZ84600.1 | SDZ78096.1 | SAMN02910418_00377 | SAMN02910418_00230 | DNA polymerase-3 subunit epsilon. | ATP-dependent DNA helicase, Rep family. | 0.957 |
SDZ84600.1 | SEA15555.1 | SAMN02910418_00377 | SAMN02910418_01011 | DNA polymerase-3 subunit epsilon. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.640 |
SDZ84600.1 | SEA17882.1 | SAMN02910418_00377 | SAMN02910418_01079 | DNA polymerase-3 subunit epsilon. | Superfamily I DNA or RNA helicase. | 0.875 |
SDZ84600.1 | SEA17915.1 | SAMN02910418_00377 | SAMN02910418_01080 | DNA polymerase-3 subunit epsilon. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.706 |
SDZ84600.1 | SEA63259.1 | SAMN02910418_00377 | SAMN02910418_02047 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.967 |
SDZ84600.1 | polA | SAMN02910418_00377 | SAMN02910418_01521 | DNA polymerase-3 subunit epsilon. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.953 |
SDZ84600.1 | recA | SAMN02910418_00377 | SAMN02910418_02381 | DNA polymerase-3 subunit epsilon. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.516 |
SDZ84600.1 | uvrB | SAMN02910418_00377 | SAMN02910418_01515 | DNA polymerase-3 subunit epsilon. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.975 |
SEA15555.1 | SDZ78096.1 | SAMN02910418_01011 | SAMN02910418_00230 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase, Rep family. | 0.988 |
SEA15555.1 | SDZ84600.1 | SAMN02910418_01011 | SAMN02910418_00377 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA polymerase-3 subunit epsilon. | 0.640 |
SEA15555.1 | SEA17882.1 | SAMN02910418_01011 | SAMN02910418_01079 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Superfamily I DNA or RNA helicase. | 0.722 |