STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA18064.1Tight adherence protein B. (282 aa)    
Predicted Functional Partners:
SEA18148.1
TadE-like protein.
 
  
 0.971
SEA18093.1
Tight adherence protein C.
 
     0.962
SEA18123.1
Hypothetical protein.
 
     0.950
SEA18174.1
Hypothetical protein.
 
     0.948
SEA18034.1
Pilus assembly protein CpaF.
 
  
 0.941
SDZ76248.1
Hypothetical protein.
 
    0.809
SDZ76273.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
 
   
 0.783
SDZ76224.1
DNA binding domain-containing protein, excisionase family.
  
     0.770
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.747
SEA24123.1
Histidine kinase-like ATPase domain-containing protein.
   
    0.726
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.