Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ85281.1 | SEA31104.1 | SAMN02910418_00403 | SAMN02910418_01331 | dUTP pyrophosphatase. | Thymidine kinase. | 0.941 |
SDZ85281.1 | thyA | SAMN02910418_00403 | SAMN02910418_02263 | dUTP pyrophosphatase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.965 |
SDZ85281.1 | tmk | SAMN02910418_00403 | SAMN02910418_01170 | dUTP pyrophosphatase. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.861 |
SDZ92039.1 | SDZ92361.1 | SAMN02910418_00539 | SAMN02910418_00549 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | 5'-nucleotidase. | 0.796 |
SDZ92039.1 | SDZ92685.1 | SAMN02910418_00539 | SAMN02910418_00559 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | Hypothetical protein. | 0.775 |
SDZ92039.1 | SEA16891.1 | SAMN02910418_00539 | SAMN02910418_01048 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.774 |
SDZ92039.1 | SEA16922.1 | SAMN02910418_00539 | SAMN02910418_01049 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | Thymidine phosphorylase. | 0.812 |
SDZ92039.1 | SEA17206.1 | SAMN02910418_00539 | SAMN02910418_01057 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.775 |
SDZ92039.1 | SEA31104.1 | SAMN02910418_00539 | SAMN02910418_01331 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | Thymidine kinase. | 0.800 |
SDZ92039.1 | thyA | SAMN02910418_00539 | SAMN02910418_02263 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.757 |
SDZ92039.1 | tmk | SAMN02910418_00539 | SAMN02910418_01170 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.779 |
SDZ92361.1 | SDZ92039.1 | SAMN02910418_00549 | SAMN02910418_00539 | 5'-nucleotidase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | 0.796 |
SDZ92361.1 | SDZ92685.1 | SAMN02910418_00549 | SAMN02910418_00559 | 5'-nucleotidase. | Hypothetical protein. | 0.976 |
SDZ92361.1 | SEA16891.1 | SAMN02910418_00549 | SAMN02910418_01048 | 5'-nucleotidase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.878 |
SDZ92361.1 | SEA16922.1 | SAMN02910418_00549 | SAMN02910418_01049 | 5'-nucleotidase. | Thymidine phosphorylase. | 0.878 |
SDZ92361.1 | SEA17206.1 | SAMN02910418_00549 | SAMN02910418_01057 | 5'-nucleotidase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.879 |
SDZ92361.1 | SEA31104.1 | SAMN02910418_00549 | SAMN02910418_01331 | 5'-nucleotidase. | Thymidine kinase. | 0.895 |
SDZ92361.1 | thyA | SAMN02910418_00549 | SAMN02910418_02263 | 5'-nucleotidase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.877 |
SDZ92361.1 | tmk | SAMN02910418_00549 | SAMN02910418_01170 | 5'-nucleotidase. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.845 |
SDZ92685.1 | SDZ92039.1 | SAMN02910418_00559 | SAMN02910418_00539 | Hypothetical protein. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase. | 0.775 |
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