Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ76441.1 | SEA42700.1 | SAMN02910418_00165 | SAMN02910418_01556 | RNA polymerase sigma-70 factor, ECF subfamily. | Putative adhesin. | 0.565 |
SDZ77347.1 | SEA42700.1 | SAMN02910418_00202 | SAMN02910418_01556 | Hypothetical protein. | Putative adhesin. | 0.565 |
SEA42575.1 | SEA42622.1 | SAMN02910418_01553 | SAMN02910418_01554 | Sodium/hydrogen exchanger family protein. | TrkA-N domain-containing protein. | 0.989 |
SEA42575.1 | SEA42658.1 | SAMN02910418_01553 | SAMN02910418_01555 | Sodium/hydrogen exchanger family protein. | Arc-like DNA binding domain-containing protein. | 0.493 |
SEA42575.1 | SEA42700.1 | SAMN02910418_01553 | SAMN02910418_01556 | Sodium/hydrogen exchanger family protein. | Putative adhesin. | 0.472 |
SEA42622.1 | SEA42575.1 | SAMN02910418_01554 | SAMN02910418_01553 | TrkA-N domain-containing protein. | Sodium/hydrogen exchanger family protein. | 0.989 |
SEA42622.1 | SEA42658.1 | SAMN02910418_01554 | SAMN02910418_01555 | TrkA-N domain-containing protein. | Arc-like DNA binding domain-containing protein. | 0.682 |
SEA42622.1 | SEA42700.1 | SAMN02910418_01554 | SAMN02910418_01556 | TrkA-N domain-containing protein. | Putative adhesin. | 0.650 |
SEA42658.1 | SEA42575.1 | SAMN02910418_01555 | SAMN02910418_01553 | Arc-like DNA binding domain-containing protein. | Sodium/hydrogen exchanger family protein. | 0.493 |
SEA42658.1 | SEA42622.1 | SAMN02910418_01555 | SAMN02910418_01554 | Arc-like DNA binding domain-containing protein. | TrkA-N domain-containing protein. | 0.682 |
SEA42658.1 | SEA42700.1 | SAMN02910418_01555 | SAMN02910418_01556 | Arc-like DNA binding domain-containing protein. | Putative adhesin. | 0.955 |
SEA42700.1 | SDZ76441.1 | SAMN02910418_01556 | SAMN02910418_00165 | Putative adhesin. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.565 |
SEA42700.1 | SDZ77347.1 | SAMN02910418_01556 | SAMN02910418_00202 | Putative adhesin. | Hypothetical protein. | 0.565 |
SEA42700.1 | SEA42575.1 | SAMN02910418_01556 | SAMN02910418_01553 | Putative adhesin. | Sodium/hydrogen exchanger family protein. | 0.472 |
SEA42700.1 | SEA42622.1 | SAMN02910418_01556 | SAMN02910418_01554 | Putative adhesin. | TrkA-N domain-containing protein. | 0.650 |
SEA42700.1 | SEA42658.1 | SAMN02910418_01556 | SAMN02910418_01555 | Putative adhesin. | Arc-like DNA binding domain-containing protein. | 0.955 |
SEA42700.1 | SEA71341.1 | SAMN02910418_01556 | SAMN02910418_02230 | Putative adhesin. | Protein ImuB. | 0.401 |
SEA42700.1 | whiB-2 | SAMN02910418_01556 | SAMN02910418_00509 | Putative adhesin. | WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.565 |
SEA71341.1 | SEA42700.1 | SAMN02910418_02230 | SAMN02910418_01556 | Protein ImuB. | Putative adhesin. | 0.401 |
whiB-2 | SEA42700.1 | SAMN02910418_00509 | SAMN02910418_01556 | WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Putative adhesin. | 0.565 |