STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA43589.1Transcriptional regulator, DeoR family. (249 aa)    
Predicted Functional Partners:
SEA53762.1
1-phosphofructokinase.
 
  
 0.868
SEA43553.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
     0.802
SEA43521.1
Dihydrolipoamide dehydrogenase.
       0.773
SEA43481.1
2-oxoisovalerate dehydrogenase E1 component.
 
    0.767
SDZ85113.1
Acyl-CoA synthetase (NDP forming).
    
   0.766
SEA43658.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.747
SEA43692.1
Transcriptional regulator, DeoR family.
 
    
0.647
SEA43627.1
D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family.
 
   
 0.638
SEA43437.1
Xylulokinase; Belongs to the FGGY kinase family.
  
    0.496
SDZ73218.1
Ribose 5-phosphate isomerase B.
  
 
 0.484
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.