Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA44793.1 | SEA44884.1 | SAMN02910418_01619 | SAMN02910418_01622 | Cell division protein FtsQ. | Cell division protein FtsW; Belongs to the SEDS family. | 0.994 |
SEA44793.1 | SEA44913.1 | SAMN02910418_01619 | SAMN02910418_01623 | Cell division protein FtsQ. | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | 0.960 |
SEA44793.1 | SEA44980.1 | SAMN02910418_01619 | SAMN02910418_01625 | Cell division protein FtsQ. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. | 0.953 |
SEA44793.1 | SEA45011.1 | SAMN02910418_01619 | SAMN02910418_01626 | Cell division protein FtsQ. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | 0.879 |
SEA44793.1 | SEA45046.1 | SAMN02910418_01619 | SAMN02910418_01627 | Cell division protein FtsQ. | Cell division protein FtsI (penicillin-binding protein 3). | 0.994 |
SEA44793.1 | SEA45105.1 | SAMN02910418_01619 | SAMN02910418_01629 | Cell division protein FtsQ. | 16S rRNA (cytosine1402-N4)-methyltransferase. | 0.743 |
SEA44793.1 | mraY | SAMN02910418_01619 | SAMN02910418_01624 | Cell division protein FtsQ. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.817 |
SEA44793.1 | murC | SAMN02910418_01619 | SAMN02910418_01620 | Cell division protein FtsQ. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.980 |
SEA44793.1 | murG | SAMN02910418_01619 | SAMN02910418_01621 | Cell division protein FtsQ. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.996 |
SEA44884.1 | SEA44793.1 | SAMN02910418_01622 | SAMN02910418_01619 | Cell division protein FtsW; Belongs to the SEDS family. | Cell division protein FtsQ. | 0.994 |
SEA44884.1 | SEA44913.1 | SAMN02910418_01622 | SAMN02910418_01623 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | 0.956 |
SEA44884.1 | SEA44980.1 | SAMN02910418_01622 | SAMN02910418_01625 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. | 0.975 |
SEA44884.1 | SEA45011.1 | SAMN02910418_01622 | SAMN02910418_01626 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | 0.926 |
SEA44884.1 | SEA45046.1 | SAMN02910418_01622 | SAMN02910418_01627 | Cell division protein FtsW; Belongs to the SEDS family. | Cell division protein FtsI (penicillin-binding protein 3). | 0.998 |
SEA44884.1 | SEA45105.1 | SAMN02910418_01622 | SAMN02910418_01629 | Cell division protein FtsW; Belongs to the SEDS family. | 16S rRNA (cytosine1402-N4)-methyltransferase. | 0.753 |
SEA44884.1 | mraY | SAMN02910418_01622 | SAMN02910418_01624 | Cell division protein FtsW; Belongs to the SEDS family. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.951 |
SEA44884.1 | murC | SAMN02910418_01622 | SAMN02910418_01620 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.992 |
SEA44884.1 | murG | SAMN02910418_01622 | SAMN02910418_01621 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.995 |
SEA44913.1 | SEA44793.1 | SAMN02910418_01623 | SAMN02910418_01619 | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | Cell division protein FtsQ. | 0.960 |
SEA44913.1 | SEA44884.1 | SAMN02910418_01623 | SAMN02910418_01622 | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | Cell division protein FtsW; Belongs to the SEDS family. | 0.956 |
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