STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA50875.1FHA domain-containing protein. (160 aa)    
Predicted Functional Partners:
kgd
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.999
SEA51033.1
Serine/threonine protein kinase.
 
 
 
 0.999
SEA51074.1
Serine/threonine protein kinase.
 
 
 
 0.999
SDZ84776.1
Serine/threonine protein kinase.
 
 
 
 0.997
SEA50836.1
FHA domain-containing protein.
 
   
 0.993
SEA50911.1
Protein phosphatase.
 
 
 0.978
SEA50993.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
 
   
 0.960
SEA50954.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
 
   
 0.915
SEA22831.1
Serine/threonine protein kinase.
 
 
 
 0.845
SDZ83897.1
Protein kinase domain-containing protein.
 
 
 
 0.813
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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