Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ83108.1 | SDZ85141.1 | SAMN02910418_00323 | SAMN02910418_00398 | Protein of unknown function. | Hypothetical protein. | 0.573 |
SDZ83108.1 | SEA22101.1 | SAMN02910418_00323 | SAMN02910418_01124 | Protein of unknown function. | Protein of unknown function. | 0.692 |
SDZ83108.1 | SEA54967.1 | SAMN02910418_00323 | SAMN02910418_01857 | Protein of unknown function. | Transcriptional regulator, IclR family. | 0.723 |
SDZ83108.1 | SEA63406.1 | SAMN02910418_00323 | SAMN02910418_02052 | Protein of unknown function. | Transmembrane protein of unknown function. | 0.738 |
SDZ85141.1 | SDZ83108.1 | SAMN02910418_00398 | SAMN02910418_00323 | Hypothetical protein. | Protein of unknown function. | 0.573 |
SDZ85141.1 | SEA54967.1 | SAMN02910418_00398 | SAMN02910418_01857 | Hypothetical protein. | Transcriptional regulator, IclR family. | 0.675 |
SEA08422.1 | SEA21308.1 | SAMN02910418_00903 | SAMN02910418_01101 | Transcriptional regulator, IclR family. | acetyl-CoA C-acetyltransferase. | 0.484 |
SEA08422.1 | SEA52909.1 | SAMN02910418_00903 | SAMN02910418_01792 | Transcriptional regulator, IclR family. | Sensor histidine kinase inhibitor, KipI family. | 0.963 |
SEA08422.1 | SEA54967.1 | SAMN02910418_00903 | SAMN02910418_01857 | Transcriptional regulator, IclR family. | Transcriptional regulator, IclR family. | 0.513 |
SEA08422.1 | leuC | SAMN02910418_00903 | SAMN02910418_01856 | Transcriptional regulator, IclR family. | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.439 |
SEA21308.1 | SEA08422.1 | SAMN02910418_01101 | SAMN02910418_00903 | acetyl-CoA C-acetyltransferase. | Transcriptional regulator, IclR family. | 0.484 |
SEA21308.1 | SEA54967.1 | SAMN02910418_01101 | SAMN02910418_01857 | acetyl-CoA C-acetyltransferase. | Transcriptional regulator, IclR family. | 0.484 |
SEA22101.1 | SDZ83108.1 | SAMN02910418_01124 | SAMN02910418_00323 | Protein of unknown function. | Protein of unknown function. | 0.692 |
SEA22101.1 | SEA54967.1 | SAMN02910418_01124 | SAMN02910418_01857 | Protein of unknown function. | Transcriptional regulator, IclR family. | 0.510 |
SEA22101.1 | SEA63406.1 | SAMN02910418_01124 | SAMN02910418_02052 | Protein of unknown function. | Transmembrane protein of unknown function. | 0.659 |
SEA52909.1 | SEA08422.1 | SAMN02910418_01792 | SAMN02910418_00903 | Sensor histidine kinase inhibitor, KipI family. | Transcriptional regulator, IclR family. | 0.963 |
SEA52909.1 | SEA54967.1 | SAMN02910418_01792 | SAMN02910418_01857 | Sensor histidine kinase inhibitor, KipI family. | Transcriptional regulator, IclR family. | 0.963 |
SEA54967.1 | SDZ83108.1 | SAMN02910418_01857 | SAMN02910418_00323 | Transcriptional regulator, IclR family. | Protein of unknown function. | 0.723 |
SEA54967.1 | SDZ85141.1 | SAMN02910418_01857 | SAMN02910418_00398 | Transcriptional regulator, IclR family. | Hypothetical protein. | 0.675 |
SEA54967.1 | SEA08422.1 | SAMN02910418_01857 | SAMN02910418_00903 | Transcriptional regulator, IclR family. | Transcriptional regulator, IclR family. | 0.513 |
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