STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA74952.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
SEA74927.1
Putative ABC transporter-associated repeat protein.
     0.976
SEA74867.1
Putative ABC transporter-associated repeat protein.
    0.918
SEA74901.1
Anchored repeat ABC transporter, substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.875
SDZ90836.1
Hypothetical protein.
 
    0.839
SDZ90783.1
Surface-anchored protein.
 
     0.779
SEA74844.1
Manganese/iron transport system ATP-binding protein.
 
    0.726
SDZ78096.1
ATP-dependent DNA helicase, Rep family.
    
  0.722
SEA14362.1
IMP dehydrogenase.
   
 
  0.710
SEA74808.1
Anchored repeat-type ABC transporter, permease subunit.
 
     0.697
SEA74977.1
Lipoate-protein ligase A.
       0.493
Your Current Organism:
Actinomyces nasicola
NCBI taxonomy Id: 208480
Other names: A. nasicola, Actinomyces nasico, Actinomyces nasicola Hall et al. 2003, CCUG 46092, CIP 107668, DSM 19116, strain R2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.