STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB28773.1Hypothetical protein, DUF948 family of general stress response. (151 aa)    
Predicted Functional Partners:
AEB28772.1
Hypothetical protein.
 
    0.935
yycH
Regulator of YycFG.
 
     0.772
AEB31028.1
Hypothetical protein.
 
    0.737
AEB28994.1
Hypothetical protein.
  
     0.735
walH
Regulator of WalKR.
 
     0.706
AEB29347.1
Conserved hypothetical protein.
  
     0.698
AEB29900.1
Hypothetical protein.
  
     0.682
yrhK
Hypothetical protein.
 
     0.645
AEB30077.1
Hypothetical protein.
  
     0.614
AEB30098.1
Hypothetical protein.
  
     0.584
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.