STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htrCPutative membrane serine protease Do. (407 aa)    
Predicted Functional Partners:
yycJ
Putative metallo-hydrolase.
  
  
 0.678
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
  
 0.651
yycH
Regulator of YycFG.
 
  
 0.613
yhfK1
Putative epimerase.
   
 
 0.606
yvlC
Putative regulator; Stress mediated.
  
  
 0.597
ywjB
Putative oxidoreductase.
  
    0.574
ykoH
Two-component sensor histidine kinase.
  
 0.563
walH
Regulator of WalKR.
 
  
 0.554
AEB30330.1
Protein of unknown function DUF214.
 
 
 0.553
rseP
Inner membrane zinc metalloprotease required for the extracytoplasmic stress response mediated by sigma(E).
 
  
 0.526
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.