STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yknXPutative efflux permease. (411 aa)    
Predicted Functional Partners:
yknZ1
Uncharacterized ABC transporter permease YknZ.
 
 
 0.985
AEB28972.1
Putative drug ABC exporter, ATP-binding and membrane-spanning/permease subunits.
  
 
 0.969
yknY1
Uncharacterized ABC transporter ATP-binding protein YknY.
 
 
 0.950
AEB30330.1
Protein of unknown function DUF214.
  
 
 0.921
yknZ2
Putative permease.
 
 
 0.893
AEB30171.1
Hypothetical protein.
 
    0.780
AEB28840.1
Hypothetical protein, transporter-like protein.
       0.734
yknY2
Putative ABC transporter; ATP-binding protein.
 
 
 0.705
AEB29183.1
Hypothetical protein.
  
     0.696
AEB28892.1
Binding-protein-dependent transport systems inner membrane component.
 
     0.665
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.